10. Web Services in der Bioinformatik | Sabine Maßmann |
AGAVE | Architecture for Genomic Annotation, Visualization and Exchange (http://www.animorphics.net/lifesci.html) |
BEEP | Internet standards-track protocol framework (http://www.beepcore.org) |
BSML | Bioinformatic Sequence Markup Language (http://www.bsml.org/) |
CORBA | Common Object Request Broker Architecture (http://www.corba.org/) |
DAS | Distributed Annotation System; ist ein Protokoll, welches HTTP und XML benutzt, um Anfragen an genomische Daten zu stellen (http://stein.cshl.org/das/) |
DTD | Document Type Declaration |
FASTA | Format zur Beschreibung einer Sequenz (http://www.ncbi.nlm.nih.gov/BLAST/fasta.html) |
FTP | File Transfer Protocol (http://www.w3.org/Protocols/rfc959/Overview.html) |
GFF | General Feature Format (http://www.sanger.ac.uk/Software/formats/GFF/) |
IETF | Internet Engineering Task Force. (http://www.ietf.org) |
JXTA | Kurzform von Juxtapose, Set von Open Protokollen zur Kommunikation in der Peer-to-Peer-Manier (http://www.jxta.org) |
SCIOBJ | Formatbezeichnung von AGAVE |
SGML | Standard Generalized Markup Language (http://www.w3.org/MarkUp/SGML/) |
SOAP | Simple Object Access Protocol (http://www.w3.org) |
UDDI | Universal Description, Discovery and Integration (http://www.uddi.org) |
URI | Uniform Resource Identifiers (http://www.w3.org/TR/ws-gloss/#RFC2396) |
W3C | World Wide Web Consortium (http://www.w3.org) |
WSDL | Web Services Description Language (http://www.w3.org/TR/wsdl) |
XML | Extensible Markup Language (http://www.w3.org/TR/REC-xml) |
XSD | XML Schema Description (http://www.w3.org/XML/Schema) |
[BP00] | Tim Bray, Jean Paoli, C.M. Sperberg-McQueen, Eve Maler
Extensible Markup Language (XML) 1.0 (Second Edition) 6.10.2000 http://www.w3.org/TR/REC-xml |
[BH02] | Allen Brown, Hugo Haas Web Services Glossary 14.11.2002 http://www.w3.org/TR/2002/WD-ws-gloss-20021114/ |
[CC01] | E. Christensen, F.Cubera,G. Meredith, S. Weerawarana Web Services Description Language (WSDL) 1.1 15.3.2001 http://www.w3.org/TR/2001/NOTE-wsdl-20010315 |
[CE02] | Cerami, Ethan: Web Services for Bioinformatics 14.5.2002 http://www.oreillynet.com/pub/a/webservices/2002/05/14/biows.html |
[CF02] | Michael Champion, Chris Ferris, Eric Newcomer, David Orchard
Web Services Architecture 14.11.2002 http://www.w3.org/TR/2002/WD-ws-arch-20021114/ |
[CO02] | COMPUTER NETWORKS: Web Services http://www94.homepage.villanova.edu/nandakumar.padmanabhan/networks/WEBSERVICES.pdf |
[DE02] | Delphi-Source.de Web-Tutorials : Webservice-Client http://www.tutorials.delphi-source.de/wsclient/file002.shtml |
[DO01] | Thomas Dohmke: Web Services mit SOAP http://thomas.dohmke.de/dokumente/soap.pdf |
[GI02] | Brian Gilman, Whitehead Institute "Using The Web Services Model To Solve Data Integration Problems In BioInformatics" |
[MA02] | mariosalexandrou.com Custom Software Development Web Services Definition http://www.mariosalexandrou.com/glossary/web_services.asp |
[MI02] | Nilo Mitra : SOAP Version 1.2 Part 0: Primer 26.5.2002 http://www.w3.org/TR/2002/WD-soap12-part0-20020626 |
[NA01] | Sklyar Nataliya : Survey of existing bio-ontologies, Technical Report September 2001 |
[NB99] | Nature Biotechnology 17, 828-830 (1999). |
[OG02] | Uche Ogbuji : 28.9.2002 The Past, Present and Future of Web Services http://www.mywebservices.org/index.php/article/articleview/679/1/24/ |
[OM02] | Whitehead Institute: OmniGene http://omnigene.sourceforge.net/ |
[RT02] | Rocco D. and T. Critchlow. 2002. Discovery and Classification of Bioinformatics Web Services. Technical Report, Lawrence Livermore National Laboratory (Sept. 2002). |
[SE02] | Stewart, Bruce: 29.1.2002 Lincoln Stein's Keynote: Building a Bioinformatics Nation, http://www.oreillynet.com/pub/a/network/2002/01/29/bioday2.html |
[SN02] | Martin Senger: OpenBQS http://industry.ebi.ac.uk/openBQS/Overview.html |
[SO02] | Solutions: Web stets zu Diensten http://www.networkcomputing.de/heft/solutions/sl-2002/sl_0502_52.htm |
[SR01] | Brent Sleeper, Bill Robins Defining Web Services Juni 2001 http://www.stencilgroup.com/ideas_scope_200106wsdefined.html |
[ST02] | Stein, Lincoln: Creating a bioinformatics nation. NATURE, vol. 417, 9 May 2002, p. 119-120. http://prometheus.frii.com/~gnat/tmp/stein_keynote.ppt |
[SU02] | Sun Microsystems: Web Services Definition http://pt.sun.com/noticias/kits/images/epitch.pdf |
[UD02] | UDDI http://www.uddi.org |
[UL02] | Tobi Ulm: Einführung in SOAP http://www.devtrain.de/news.aspx?artnr=422 |
[XE02] | XEMBL http://www.ebi.ac.uk/xembl/ |
[XM02] | Xmethods.net http://www.xmethods.net/ |